Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 RNU6-1257P-201ENST00000384625 110 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AL645733.1-201ENST00000402250 217 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AP002530.1-201ENST00000405705 684 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 OR2X1P-201ENST00000421144 687 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC073850.1-201ENST00000449243 255 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC104634.1-201ENST00000452720 462 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AL645937.3-201ENST00000453647 936 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC093166.2-201ENST00000455969 1017 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC090543.1-201ENST00000492168 485 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC231760.1-201ENST00000498002 260 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 PCNAP1-201ENST00000505363 709 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC021106.1-201ENST00000509020 1058 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 RNU6-889P-201ENST00000517189 103 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 RNA5SP373-201ENST00000517271 95 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 NPM1P35-201ENST00000533043 868 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC090666.1-201ENST00000578241 445 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC008751.2-201ENST00000597885 980 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 uc_338.7-201ENST00000621834 124 ntBASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HLA-DOAP06340 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HLA-DOAP06340 AC079097.1-201ENST00000512187 1399 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DOAP06340 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DOAP06340 RNU6-792P-201ENST00000363490 107 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 U3.10-201ENST00000364459 214 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AL353625.1-202ENST00000366273 571 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 RN7SKP125-201ENST00000410481 302 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC211486.3-201ENST00000412694 621 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC005005.2-201ENST00000420779 380 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 RPL12P3-201ENST00000440080 396 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC073465.2-201ENST00000440938 498 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 XKRY2-201ENST00000442362 1093 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 Z99714.1-201ENST00000450463 807 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 RNU7-157P-201ENST00000459600 66 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC096992.1-201ENST00000459808 709 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC009127.1-201ENST00000467090 155 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 CBX1P5-201ENST00000475330 559 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 GTF2F2P1-201ENST00000511083 675 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 EIF3KP3-201ENST00000514461 639 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 RN7SKP66-201ENST00000516681 231 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 OR8G5-201ENST00000524943 1041 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC027281.1-201ENST00000574178 758 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC005951.1-201ENST00000576706 485 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 BNIP3P24-201ENST00000593398 557 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 AP002799.1-201ENST00000623552 423 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 LINC01739-205ENST00000641890 573 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DOAP06340 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 AC073429.2-201ENST00000569694 1444 ntBASIC6.32□□□□□ -1.4
HLA-DOAP06340 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HLA-DOAP06340 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms