Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC064862.4-201ENST00000442180 334 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 MRPL35P2-201ENST00000448009 511 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 RPL31P20-201ENST00000449593 360 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 DNAJB5P1-201ENST00000454004 806 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AC079168.1-201ENST00000458741 345 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AC074087.1-201ENST00000512059 724 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 RNA5SP303-201ENST00000516192 130 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 SEC11B-201ENST00000518383 499 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC015720.2-201ENST00000567709 334 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 RBM22P1-201ENST00000578589 1214 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AL121890.2-201ENST00000617644 465 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 RMST_5.1-201ENST00000618704 126 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 SAMMSON-209ENST00000641222 1100 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.64
MT-ND1P03886 AL121950.1-201ENST00000624993 2077 ntBASIC4.84□□□□□ -1.64
MT-ND1P03886 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
MT-ND1P03886 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MT-ND1P03886 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MT-ND1P03886 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.83□□□□□ -1.64
MT-ND1P03886 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 ZNF652P1-201ENST00000442420 1309 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.83□□□□□ -1.64
MT-ND1P03886 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MT-ND1P03886 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC013442.1-201ENST00000397347 228 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.83□□□□□ -1.64
MT-ND1P03886 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.83□□□□□ -1.64
MT-ND1P03886 RPL23AP19-201ENST00000436229 369 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 NDUFA5P8-201ENST00000449019 346 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 CCRL1P1-201ENST00000449542 1053 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 NPM1P39-201ENST00000449818 867 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC069277.2-201ENST00000454211 432 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AL356981.1-201ENST00000454879 684 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC005412.2-201ENST00000492004 341 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 RN7SL447P-201ENST00000494711 245 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.83□□□□□ -1.64
MT-ND1P03886 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC022826.1-201ENST00000519383 805 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 YWHABP2-201ENST00000540201 713 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 MIR1273E-201ENST00000581165 102 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 RN7SL435P-201ENST00000584418 282 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.83□□□□□ -1.64
MT-ND1P03886 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC245128.3-201ENST00000594721 748 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 SNX6P1-201ENST00000601728 1224 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AC005252.1-201ENST00000604518 1063 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AL359742.1-201ENST00000622497 540 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
MT-ND1P03886 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MT-ND1P03886 AC087565.3-202ENST00000642085 1603 ntBASIC4.83□□□□□ -1.64
MT-ND1P03886 AC019072.1-201ENST00000604535 1551 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MT-ND1P03886 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 MIR133B-201ENST00000362210 119 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 RNA5SP319-201ENST00000362768 119 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 RNA5SP510-201ENST00000364697 99 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 MIR105-1-201ENST00000385222 81 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 RNA5SP487-201ENST00000410186 122 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.82□□□□□ -1.64
MT-ND1P03886 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.82□□□□□ -1.64
MT-ND1P03886 IPPKP1-201ENST00000422501 768 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 AJ239321.1-201ENST00000424255 564 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
MT-ND1P03886 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.82□□□□□ -1.64
MT-ND1P03886 RPL36AP39-201ENST00000445859 318 ntBASIC4.82□□□□□ -1.64
MT-ND1P03886 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms