Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.26□□□□□ -1.73
UPK1BO75841 RPL7P50-201ENST00000600588 727 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 SNORA35B-201ENST00000607417 129 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AC012414.7-202ENST00000622705 1090 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AC006453.5-201ENST00000636451 619 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC087565.3-203ENST00000641018 837 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 RNF19BPY-201ENST00000458209 1550 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC112255.1-201ENST00000624070 2493 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 RNA5SP513-201ENST00000364648 118 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 AL133388.1-201ENST00000404509 287 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC096644.3-201ENST00000416788 338 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 AL133173.1-201ENST00000423458 397 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 AC127526.2-201ENST00000426436 775 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 NANOGP6-201ENST00000429190 847 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 SERPINA7P1-201ENST00000443077 631 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 AL161636.2-201ENST00000445179 927 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 AL450996.1-201ENST00000445574 1202 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 LRRC37A14P-201ENST00000452297 462 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 CCDC75P1-201ENST00000469247 791 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 RNU6-615P-201ENST00000516065 106 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 Y_RNA.719-201ENST00000517156 106 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 IGKV3D-25-201ENST00000519599 235 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC078878.1-201ENST00000539832 958 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC007956.1-201ENST00000555623 542 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC024267.2-201ENST00000582737 417 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.25□□□□□ -1.73
UPK1BO75841 AC083964.1-201ENST00000607549 630 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.25□□□□□ -1.73
UPK1BO75841 AL353726.1-201ENST00000614041 1000 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 uc_338.31-201ENST00000615595 186 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.25□□□□□ -1.73
UPK1BO75841 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.25□□□□□ -1.73
UPK1BO75841 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
UPK1BO75841 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPK1BO75841 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1BO75841 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
UPK1BO75841 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 OR56B2P-201ENST00000317102 954 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 Y_RNA.209-201ENST00000364156 111 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 AL353625.1-202ENST00000366273 571 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 FTH1P26-201ENST00000406512 701 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.24□□□□□ -1.73
UPK1BO75841 VN1R3-201ENST00000418822 919 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
UPK1BO75841 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.24□□□□□ -1.73
UPK1BO75841 NDUFS5P5-201ENST00000437256 321 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.24□□□□□ -1.73
UPK1BO75841 AC019185.3-201ENST00000438805 323 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 RPS29P9-201ENST00000440360 171 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 HMGB3P9-201ENST00000441799 583 ntBASIC4.24□□□□□ -1.73
UPK1BO75841 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPK1BO75841 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.24□□□□□ -1.73
UPK1BO75841 CST12P-201ENST00000457644 362 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms