Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 AC073429.2-201ENST00000569694 1444 ntBASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPIPA2E9PIF3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AL359715.3-201ENST00000569267 2123 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 RN7SKP74-201ENST00000362849 309 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 U3.2-201ENST00000362981 210 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 MIR765-201ENST00000390226 114 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 MIR937-201ENST00000401271 86 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 XKRYP6-201ENST00000440468 1116 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 XKRYP3-201ENST00000442113 1116 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 CEACAMP7-201ENST00000444105 496 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 HSPE1P22-201ENST00000456856 327 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 RN7SL329P-201ENST00000467740 299 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 RPL7AP6-201ENST00000477943 801 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 RN7SL591P-201ENST00000496150 292 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AK4P6-201ENST00000505168 528 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC117525.1-201ENST00000515228 503 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AP004607.2-201ENST00000533949 322 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC005341.1-201ENST00000571086 708 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC027281.1-201ENST00000574178 758 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 MIR4675-201ENST00000577898 77 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC069307.1-201ENST00000602820 447 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 BNIP3P7-201ENST00000605641 516 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC012213.4-201ENST00000606457 354 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC004241.3-201ENST00000611728 517 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 MIR6133-201ENST00000617057 108 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC073869.8-201ENST00000641806 335 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 AC104260.2-201ENST00000623551 3497 ntBASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.87□□□□□ -1.63
NPIPA2E9PIF3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC010132.2-201ENST00000295493 1043 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 HSPA8P15-201ENST00000401676 786 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 OR4K12P-201ENST00000406538 961 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DUTP5-201ENST00000406790 469 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC244453.4-201ENST00000419150 388 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC093655.2-201ENST00000425735 631 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 RPS27AP6-201ENST00000427962 448 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 RNU6-513P-201ENST00000516104 104 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC087763.1-201ENST00000603391 286 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AC009163.6-201ENST00000612367 342 ntBASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.86□□□□□ -1.63
NPIPA2E9PIF3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms