Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.06□□□□□ -0.32
CcsQ9WU84 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.06□□□□□ -0.32
CcsQ9WU84 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.06□□□□□ -0.32
CcsQ9WU84 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.06□□□□□ -0.32
CcsQ9WU84 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.06□□□□□ -0.32
CcsQ9WU84 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.06□□□□□ -0.32
CcsQ9WU84 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CcsQ9WU84 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Gm27011-201ENSMUST00000182352 972 ntBASIC13.05□□□□□ -0.32
CcsQ9WU84 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CcsQ9WU84 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CcsQ9WU84 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.05□□□□□ -0.32
CcsQ9WU84 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.04□□□□□ -0.32
CcsQ9WU84 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Rab3c-203ENSMUST00000224180 967 ntBASIC13.04□□□□□ -0.32
CcsQ9WU84 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CcsQ9WU84 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CcsQ9WU84 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms