Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1fQ9JIS7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Gm36967-201ENSMUST00000193814 266 ntBASIC19■□□□□ 0.63
Cacna1fQ9JIS7 AC084391.1-201ENSMUST00000200651 141 ntBASIC19■□□□□ 0.63
Cacna1fQ9JIS7 AC154757.1-201ENSMUST00000228289 336 ntBASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1fQ9JIS7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Gm9172-201ENSMUST00000212092 954 ntBASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Gm5364-201ENSMUST00000216789 889 ntBASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1fQ9JIS7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1fQ9JIS7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Gm7862-201ENSMUST00000121461 292 ntBASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1fQ9JIS7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms