Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tube1Q9D6T1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tube1Q9D6T1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tube1Q9D6T1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tube1Q9D6T1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tube1Q9D6T1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tube1Q9D6T1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Gm25016-201ENSMUST00000158399 131 ntBASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tube1Q9D6T1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tube1Q9D6T1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tube1Q9D6T1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.59■□□□□ 0.57
Tube1Q9D6T1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Gm14859-201ENSMUST00000117752 357 ntBASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tube1Q9D6T1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tube1Q9D6T1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms