Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chd1lQ9CXF7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Mir6349-201ENSMUST00000184059 97 ntBASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Gm26524-201ENSMUST00000192339 390 ntBASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 AV356131-201ENSMUST00000206201 750 ntBASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd1lQ9CXF7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd1lQ9CXF7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd1lQ9CXF7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd1lQ9CXF7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms