Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Phf7-203ENSMUST00000226565 1971 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Gm13186-201ENSMUST00000118031 316 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Gm13474-201ENSMUST00000122466 815 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Gm44044-201ENSMUST00000205178 1089 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retreg3Q9CQV4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retreg3Q9CQV4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Retreg3Q9CQV4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Thoc7-209ENSMUST00000225325 765 ntBASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retreg3Q9CQV4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retreg3Q9CQV4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Gm27741-201ENSMUST00000185060 237 ntBASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Gm33142-201ENSMUST00000193913 867 ntBASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Gm18032-201ENSMUST00000222541 538 ntBASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retreg3Q9CQV4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms