Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chchd1Q9CQA6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chchd1Q9CQA6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Chchd1Q9CQA6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chchd1Q9CQA6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms