Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Gm44549-201ENSMUST00000208351 577 ntBASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb3Q91XZ7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb3Q91XZ7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb3Q91XZ7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb3Q91XZ7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb3Q91XZ7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms