Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cspg4Q8VHY0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cspg4Q8VHY0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.4□□□□□ -0.1
Cspg4Q8VHY0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cspg4Q8VHY0 Gm13312-201ENSMUST00000119631 718 ntBASIC14.4□□□□□ -0.11
Cspg4Q8VHY0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.4□□□□□ -0.11
Cspg4Q8VHY0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cspg4Q8VHY0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cspg4Q8VHY0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cspg4Q8VHY0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg4Q8VHY0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Gm44450-201ENSMUST00000199528 114 ntBASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Mir6956-201ENSMUST00000183598 62 ntBASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg4Q8VHY0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 AA543401-201ENSMUST00000164248 1269 ntBASIC14.35□□□□□ -0.11
Cspg4Q8VHY0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms