Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Gm27000-201ENSMUST00000182943 842 ntBASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ubqln1Q8R317 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.89■□□□□ 0.13
Ubqln1Q8R317 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.89■□□□□ 0.13
Ubqln1Q8R317 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Gm2274-201ENSMUST00000184539 609 ntBASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ubqln1Q8R317 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.87■□□□□ 0.13
Ubqln1Q8R317 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ubqln1Q8R317 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Gm11539-201ENSMUST00000119837 557 ntBASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Gm13436-201ENSMUST00000120418 567 ntBASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ubqln1Q8R317 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubqln1Q8R317 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubqln1Q8R317 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubqln1Q8R317 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ubqln1Q8R317 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms