Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Zcchc9Q8R1J3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.7■□□□□ 0.26
Zcchc9Q8R1J3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zcchc9Q8R1J3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Idnk-204ENSMUST00000226010 1898 ntBASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zcchc9Q8R1J3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zcchc9Q8R1J3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms