Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snapc1Q8K0S9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snapc1Q8K0S9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snapc1Q8K0S9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snapc1Q8K0S9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snapc1Q8K0S9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Gm7291-201ENSMUST00000199147 382 ntBASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Flg-201ENSMUST00000050758 1488 ntBASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Snapc1Q8K0S9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snapc1Q8K0S9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Snapc1Q8K0S9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Gm42569-201ENSMUST00000200539 472 ntBASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Gm10033-202ENSMUST00000211874 928 ntBASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Snapc1Q8K0S9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms