Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbm28Q8CGC6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Gm27741-201ENSMUST00000185060 237 ntBASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rbm28Q8CGC6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbm28Q8CGC6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rbm28Q8CGC6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rbm28Q8CGC6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Mir770-201ENSMUST00000103252 94 ntBASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Gm6623-201ENSMUST00000173570 544 ntBASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rbm28Q8CGC6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rbm28Q8CGC6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rbm28Q8CGC6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rbm28Q8CGC6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rbm28Q8CGC6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rbm28Q8CGC6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rbm28Q8CGC6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms