Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp43Q8BUM9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp43Q8BUM9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp43Q8BUM9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp43Q8BUM9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Usp43Q8BUM9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp43Q8BUM9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp43Q8BUM9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp43Q8BUM9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp43Q8BUM9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp43Q8BUM9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp43Q8BUM9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms