Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rd3Q8BRE0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Birc2-201ENSMUST00000054878 378 ntBASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rd3Q8BRE0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Gm12895-201ENSMUST00000122214 226 ntBASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rd3Q8BRE0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rd3Q8BRE0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Rd3Q8BRE0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rd3Q8BRE0 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.77■□□□□ 0.43
Rd3Q8BRE0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rd3Q8BRE0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rd3Q8BRE0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Gm43347-201ENSMUST00000200226 580 ntBASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rd3Q8BRE0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rd3Q8BRE0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rd3Q8BRE0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms