Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp1Q8BJQ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Usp1Q8BJQ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp1Q8BJQ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp1Q8BJQ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp1Q8BJQ2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Usp1Q8BJQ2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp1Q8BJQ2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Usp1Q8BJQ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp1Q8BJQ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms