Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Gm11452-201ENSMUST00000122376 690 ntBASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Gm27525-201ENSMUST00000184465 107 ntBASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.32■□□□□ 0.68
Prpf40bQ80W14 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf40bQ80W14 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Prpf40bQ80W14 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Gm13401-201ENSMUST00000117074 291 ntBASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf40bQ80W14 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Gm18206-201ENSMUST00000207027 926 ntBASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Prpf40bQ80W14 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Gm37025-201ENSMUST00000195159 829 ntBASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf40bQ80W14 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf40bQ80W14 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prpf40bQ80W14 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.27■□□□□ 0.68
Prpf40bQ80W14 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf40bQ80W14 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms