Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.22■□□□□ 0.83
Kdm3aQ6PCM1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.22■□□□□ 0.83
Kdm3aQ6PCM1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Kdm3aQ6PCM1 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.22■□□□□ 0.83
Kdm3aQ6PCM1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm3aQ6PCM1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm3aQ6PCM1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Gm9103-201ENSMUST00000119371 405 ntBASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm3aQ6PCM1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Mir3081-201ENSMUST00000175305 84 ntBASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Gm18669-201ENSMUST00000216049 778 ntBASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm3aQ6PCM1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.18■□□□□ 0.82
Kdm3aQ6PCM1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm3aQ6PCM1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm3aQ6PCM1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms