Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16■□□□□ 0.15
CishQ62225 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Gm6659-201ENSMUST00000174752 547 ntBASIC16■□□□□ 0.15
CishQ62225 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16■□□□□ 0.15
CishQ62225 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CishQ62225 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CishQ62225 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
CishQ62225 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CishQ62225 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.99■□□□□ 0.15
CishQ62225 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CishQ62225 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.99■□□□□ 0.15
CishQ62225 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CishQ62225 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CishQ62225 Gm7977-201ENSMUST00000193787 748 ntBASIC15.99■□□□□ 0.15
CishQ62225 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.99■□□□□ 0.15
CishQ62225 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.99■□□□□ 0.15
CishQ62225 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CishQ62225 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.99■□□□□ 0.15
CishQ62225 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CishQ62225 Phf7-203ENSMUST00000226565 1971 ntBASIC15.98■□□□□ 0.15
CishQ62225 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.98■□□□□ 0.15
CishQ62225 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.98■□□□□ 0.15
CishQ62225 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CishQ62225 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Gm11355-201ENSMUST00000121120 306 ntBASIC15.98■□□□□ 0.15
CishQ62225 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.98■□□□□ 0.15
CishQ62225 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.98■□□□□ 0.15
CishQ62225 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.98■□□□□ 0.15
CishQ62225 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CishQ62225 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CishQ62225 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CishQ62225 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CishQ62225 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CishQ62225 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CishQ62225 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Gm23634-201ENSMUST00000175071 91 ntBASIC15.97■□□□□ 0.15
CishQ62225 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.97■□□□□ 0.15
CishQ62225 Gm18115-201ENSMUST00000221209 621 ntBASIC15.97■□□□□ 0.15
CishQ62225 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CishQ62225 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CishQ62225 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CishQ62225 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms