Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn4Q61418 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn4Q61418 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn4Q61418 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Clcn4Q61418 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.46■□□□□ 0.07
Clcn4Q61418 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Clcn4Q61418 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.46■□□□□ 0.07
Clcn4Q61418 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Gm43183-201ENSMUST00000200632 547 ntBASIC15.46■□□□□ 0.07
Clcn4Q61418 Gm4974-201ENSMUST00000209974 875 ntBASIC15.46■□□□□ 0.07
Clcn4Q61418 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn4Q61418 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clcn4Q61418 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clcn4Q61418 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.45■□□□□ 0.06
Clcn4Q61418 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn4Q61418 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Clcn4Q61418 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.44■□□□□ 0.06
Clcn4Q61418 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Mir5122-201ENSMUST00000175004 89 ntBASIC15.44■□□□□ 0.06
Clcn4Q61418 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.44■□□□□ 0.06
Clcn4Q61418 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.44■□□□□ 0.06
Clcn4Q61418 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.44■□□□□ 0.06
Clcn4Q61418 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clcn4Q61418 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clcn4Q61418 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Gm10517-202ENSMUST00000192970 758 ntBASIC15.43■□□□□ 0.06
Clcn4Q61418 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.43■□□□□ 0.06
Clcn4Q61418 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.43■□□□□ 0.06
Clcn4Q61418 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms