Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Six4Q61321 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.92■□□□□ 0.3
Six4Q61321 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.92■□□□□ 0.3
Six4Q61321 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Gm10013-201ENSMUST00000106074 672 ntBASIC16.92■□□□□ 0.3
Six4Q61321 Gm27389-201ENSMUST00000183622 195 ntBASIC16.92■□□□□ 0.3
Six4Q61321 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.92■□□□□ 0.3
Six4Q61321 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.92■□□□□ 0.3
Six4Q61321 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.92■□□□□ 0.3
Six4Q61321 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Six4Q61321 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six4Q61321 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Six4Q61321 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.92■□□□□ 0.3
Six4Q61321 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.92■□□□□ 0.3
Six4Q61321 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Six4Q61321 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.91■□□□□ 0.3
Six4Q61321 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Gm44450-201ENSMUST00000199528 114 ntBASIC16.91■□□□□ 0.3
Six4Q61321 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Six4Q61321 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.91■□□□□ 0.3
Six4Q61321 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six4Q61321 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Six4Q61321 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Gm13216-201ENSMUST00000117145 591 ntBASIC16.9■□□□□ 0.3
Six4Q61321 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.9■□□□□ 0.3
Six4Q61321 Gm18115-201ENSMUST00000221209 621 ntBASIC16.9■□□□□ 0.3
Six4Q61321 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Six4Q61321 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.9■□□□□ 0.3
Six4Q61321 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Six4Q61321 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.9■□□□□ 0.3
Six4Q61321 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Six4Q61321 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.9■□□□□ 0.3
Six4Q61321 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six4Q61321 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Six4Q61321 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Six4Q61321 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Six4Q61321 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Six4Q61321 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.89■□□□□ 0.29
Six4Q61321 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Gm11336-201ENSMUST00000118168 334 ntBASIC16.89■□□□□ 0.29
Six4Q61321 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Six4Q61321 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Six4Q61321 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six4Q61321 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.88■□□□□ 0.29
Six4Q61321 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Six4Q61321 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Six4Q61321 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Six4Q61321 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six4Q61321 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.88■□□□□ 0.29
Six4Q61321 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms