Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-4Q5R1H9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-4Q5R1H9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7d-4Q5R1H9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7d-4Q5R1H9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7d-4Q5R1H9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7d-4Q5R1H9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav7d-4Q5R1H9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav7d-4Q5R1H9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav7d-4Q5R1H9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms