Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Npas1P97459 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.1□□□□□ -0.15
Npas1P97459 Mir8112-201ENSMUST00000184382 131 ntBASIC14.1□□□□□ -0.15
Npas1P97459 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Npas1P97459 Gm10033-202ENSMUST00000211874 928 ntBASIC14.1□□□□□ -0.15
Npas1P97459 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Npas1P97459 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Npas1P97459 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Npas1P97459 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Gm29791-202ENSMUST00000207888 369 ntBASIC14.09□□□□□ -0.15
Npas1P97459 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.09□□□□□ -0.15
Npas1P97459 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Npas1P97459 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Npas1P97459 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
Npas1P97459 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Npas1P97459 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Npas1P97459 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Npas1P97459 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Npas1P97459 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Npas1P97459 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Npas1P97459 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Npas1P97459 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Npas1P97459 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.08□□□□□ -0.16
Npas1P97459 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.08□□□□□ -0.16
Npas1P97459 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Npas1P97459 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Npas1P97459 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Npas1P97459 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.07□□□□□ -0.16
Npas1P97459 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Npas1P97459 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Npas1P97459 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Npas1P97459 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.07□□□□□ -0.16
Npas1P97459 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.07□□□□□ -0.16
Npas1P97459 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Npas1P97459 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Npas1P97459 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms