Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Rps4l-201ENSMUST00000071745 943 ntBASIC21.1■□□□□ 0.97
Nkx2-3P97334 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nkx2-3P97334 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.09■□□□□ 0.97
Nkx2-3P97334 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.09■□□□□ 0.97
Nkx2-3P97334 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-3P97334 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.08■□□□□ 0.97
Nkx2-3P97334 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Gm18733-201ENSMUST00000173950 856 ntBASIC21.08■□□□□ 0.97
Nkx2-3P97334 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Gm2651-201ENSMUST00000203560 838 ntBASIC21.08■□□□□ 0.97
Nkx2-3P97334 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-3P97334 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-3P97334 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-3P97334 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.08■□□□□ 0.96
Nkx2-3P97334 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-3P97334 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Nkx2-3P97334 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Gm6376-201ENSMUST00000209407 580 ntBASIC21.07■□□□□ 0.96
Nkx2-3P97334 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-3P97334 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.06■□□□□ 0.96
Nkx2-3P97334 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-3P97334 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.05■□□□□ 0.96
Nkx2-3P97334 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Mir5131-201ENSMUST00000175426 93 ntBASIC21.05■□□□□ 0.96
Nkx2-3P97334 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms