Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.39■□□□□ 0.53
Sparcl1P70663 Gm18958-201ENSMUST00000174258 762 ntBASIC18.39■□□□□ 0.53
Sparcl1P70663 Gm37722-201ENSMUST00000193757 208 ntBASIC18.39■□□□□ 0.53
Sparcl1P70663 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sparcl1P70663 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sparcl1P70663 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Sparcl1P70663 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sparcl1P70663 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.38■□□□□ 0.53
Sparcl1P70663 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Sparcl1P70663 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sparcl1P70663 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Gm6623-201ENSMUST00000173570 544 ntBASIC18.38■□□□□ 0.53
Sparcl1P70663 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sparcl1P70663 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sparcl1P70663 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sparcl1P70663 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.37■□□□□ 0.53
Sparcl1P70663 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.37■□□□□ 0.53
Sparcl1P70663 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sparcl1P70663 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.36■□□□□ 0.53
Sparcl1P70663 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sparcl1P70663 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.36■□□□□ 0.53
Sparcl1P70663 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Sparcl1P70663 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Gm18669-201ENSMUST00000216049 778 ntBASIC18.36■□□□□ 0.53
Sparcl1P70663 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sparcl1P70663 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sparcl1P70663 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.35■□□□□ 0.53
Sparcl1P70663 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Sparcl1P70663 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.35■□□□□ 0.53
Sparcl1P70663 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sparcl1P70663 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sparcl1P70663 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sparcl1P70663 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sparcl1P70663 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sparcl1P70663 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sparcl1P70663 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sparcl1P70663 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.34■□□□□ 0.53
Sparcl1P70663 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms