Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.18■□□□□ 0.18
Lbx1P52955 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.18■□□□□ 0.18
Lbx1P52955 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lbx1P52955 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lbx1P52955 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.18■□□□□ 0.18
Lbx1P52955 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Lbx1P52955 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lbx1P52955 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.17■□□□□ 0.18
Lbx1P52955 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.17■□□□□ 0.18
Lbx1P52955 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.17■□□□□ 0.18
Lbx1P52955 Gm7506-201ENSMUST00000207758 815 ntBASIC16.17■□□□□ 0.18
Lbx1P52955 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Lbx1P52955 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.17■□□□□ 0.18
Lbx1P52955 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.17■□□□□ 0.18
Lbx1P52955 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Lbx1P52955 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lbx1P52955 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Lbx1P52955 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.16■□□□□ 0.18
Lbx1P52955 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.16■□□□□ 0.18
Lbx1P52955 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.16■□□□□ 0.18
Lbx1P52955 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Lbx1P52955 Tgds-204ENSMUST00000228543 1594 ntBASIC16.16■□□□□ 0.18
Lbx1P52955 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.16■□□□□ 0.18
Lbx1P52955 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lbx1P52955 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lbx1P52955 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lbx1P52955 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lbx1P52955 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lbx1P52955 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lbx1P52955 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.14■□□□□ 0.17
Lbx1P52955 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lbx1P52955 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.14■□□□□ 0.17
Lbx1P52955 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.14■□□□□ 0.17
Lbx1P52955 Gm29791-202ENSMUST00000207888 369 ntBASIC16.14■□□□□ 0.17
Lbx1P52955 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.14■□□□□ 0.17
Lbx1P52955 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lbx1P52955 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lbx1P52955 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
Lbx1P52955 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms