Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sdc1P18828 Gm9959-201ENSMUST00000068277 390 ntBASIC13.84□□□□□ -0.19
Sdc1P18828 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sdc1P18828 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Sdc1P18828 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sdc1P18828 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Sdc1P18828 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sdc1P18828 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.83□□□□□ -0.2
Sdc1P18828 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sdc1P18828 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Gm43060-201ENSMUST00000200621 289 ntBASIC13.83□□□□□ -0.2
Sdc1P18828 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sdc1P18828 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sdc1P18828 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sdc1P18828 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sdc1P18828 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sdc1P18828 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc1P18828 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sdc1P18828 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sdc1P18828 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Sdc1P18828 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.82□□□□□ -0.2
Sdc1P18828 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sdc1P18828 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sdc1P18828 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc1P18828 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sdc1P18828 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc1P18828 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc1P18828 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sdc1P18828 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc1P18828 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc1P18828 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.81□□□□□ -0.2
Sdc1P18828 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc1P18828 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sdc1P18828 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc1P18828 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sdc1P18828 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.8□□□□□ -0.2
Sdc1P18828 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms