Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Gm27628-201ENSMUST00000184911 107 ntBASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf17O88472 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.55■□□□□ 0.08
Tnfrsf17O88472 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tnfrsf17O88472 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Gm44450-201ENSMUST00000199528 114 ntBASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tnfrsf17O88472 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Gm13036-201ENSMUST00000117799 748 ntBASIC15.53■□□□□ 0.08
Tnfrsf17O88472 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Gm6550-201ENSMUST00000187574 993 ntBASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Gm43438-201ENSMUST00000198133 379 ntBASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Chchd1-203ENSMUST00000224633 557 ntBASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Tnfrsf17O88472 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tnfrsf17O88472 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms