Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ldb2O55203 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.67■□□□□ 0.26
Ldb2O55203 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Gm6433-201ENSMUST00000118634 875 ntBASIC16.67■□□□□ 0.26
Ldb2O55203 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ldb2O55203 Gm45058-201ENSMUST00000205810 766 ntBASIC16.67■□□□□ 0.26
Ldb2O55203 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ldb2O55203 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ldb2O55203 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.67■□□□□ 0.26
Ldb2O55203 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Ldb2O55203 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.66■□□□□ 0.26
Ldb2O55203 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ldb2O55203 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Mir5130-201ENSMUST00000175160 84 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Gm18959-201ENSMUST00000208954 655 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Gm7213-201ENSMUST00000215977 950 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.66■□□□□ 0.26
Ldb2O55203 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Gm10566-201ENSMUST00000086739 996 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Haglr-201ENSMUST00000100000 2085 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ldb2O55203 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ldb2O55203 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ldb2O55203 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ldb2O55203 Phf7-203ENSMUST00000226565 1971 ntBASIC16.66■□□□□ 0.26
Ldb2O55203 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ldb2O55203 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ldb2O55203 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.65■□□□□ 0.26
Ldb2O55203 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ldb2O55203 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ldb2O55203 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ldb2O55203 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ldb2O55203 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ldb2O55203 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ldb2O55203 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ldb2O55203 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.63■□□□□ 0.25
Ldb2O55203 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ldb2O55203 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ldb2O55203 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ldb2O55203 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms