Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.98□□□□□ -0.01
Lsm2O35900 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm2O35900 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lsm2O35900 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.98□□□□□ -0.01
Lsm2O35900 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm2O35900 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm2O35900 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
Lsm2O35900 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.97□□□□□ -0.01
Lsm2O35900 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm2O35900 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Lsm2O35900 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Lsm2O35900 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lsm2O35900 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.96□□□□□ -0.01
Lsm2O35900 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.96□□□□□ -0.01
Lsm2O35900 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.96□□□□□ -0.01
Lsm2O35900 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm2O35900 Rab3c-203ENSMUST00000224180 967 ntBASIC14.96□□□□□ -0.01
Lsm2O35900 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm2O35900 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm2O35900 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm2O35900 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm2O35900 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm2O35900 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm2O35900 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Gm42642-201ENSMUST00000200683 355 ntBASIC14.95□□□□□ -0.02
Lsm2O35900 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.95□□□□□ -0.02
Lsm2O35900 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm2O35900 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm2O35900 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lsm2O35900 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm2O35900 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm2O35900 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm2O35900 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Gm13148-201ENSMUST00000118892 745 ntBASIC14.94□□□□□ -0.02
Lsm2O35900 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.94□□□□□ -0.02
Lsm2O35900 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm2O35900 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm2O35900 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm2O35900 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm2O35900 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm2O35900 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm2O35900 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms