Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.37■□□□□ 0.21
Npc1O35604 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Npc1O35604 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Gm25016-201ENSMUST00000158399 131 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Gm23634-201ENSMUST00000175071 91 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Gm21559-201ENSMUST00000220638 855 ntBASIC16.36■□□□□ 0.21
Npc1O35604 Gm8587-201ENSMUST00000076538 843 ntBASIC16.36■□□□□ 0.21
Npc1O35604 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Npc1O35604 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.36■□□□□ 0.21
Npc1O35604 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Npc1O35604 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.35■□□□□ 0.21
Npc1O35604 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 AA414768-201ENSMUST00000121924 1257 ntBASIC16.35■□□□□ 0.21
Npc1O35604 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Npc1O35604 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Npc1O35604 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Npc1O35604 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Npc1O35604 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Npc1O35604 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Npc1O35604 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.34■□□□□ 0.21
Npc1O35604 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Npc1O35604 Haglr-201ENSMUST00000100000 2085 ntBASIC16.33■□□□□ 0.21
Npc1O35604 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Npc1O35604 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Npc1O35604 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.33■□□□□ 0.2
Npc1O35604 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Npc1O35604 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Npc1O35604 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.33■□□□□ 0.2
Npc1O35604 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Npc1O35604 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Gm9013-201ENSMUST00000132939 882 ntBASIC16.32■□□□□ 0.2
Npc1O35604 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Npc1O35604 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.32■□□□□ 0.2
Npc1O35604 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Npc1O35604 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms