Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm10553J3QPF1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gm10013-201ENSMUST00000106074 672 ntBASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gm27389-201ENSMUST00000183622 195 ntBASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Mir1668-201ENSMUST00000184114 107 ntBASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm10553J3QPF1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Gm21559-201ENSMUST00000220638 855 ntBASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Gm8587-201ENSMUST00000076538 843 ntBASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm10553J3QPF1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Actl10-202ENSMUST00000226583 1501 ntBASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Gm6659-201ENSMUST00000174752 547 ntBASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm10553J3QPF1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm10553J3QPF1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm10553J3QPF1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm10553J3QPF1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms