Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-3J3QMG8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Gm43799-201ENSMUST00000201845 579 ntBASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-3J3QMG8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Gm16061-201ENSMUST00000122167 857 ntBASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-3J3QMG8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Gm7889-201ENSMUST00000185591 958 ntBASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Haglr-201ENSMUST00000100000 2085 ntBASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-3J3QMG8 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Gm13474-201ENSMUST00000122466 815 ntBASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-3J3QMG8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-3J3QMG8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-3J3QMG8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-3J3QMG8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-3J3QMG8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms