Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh9F8VPK8 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh9F8VPK8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Mir1199-201ENSMUST00000117015 119 ntBASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh9F8VPK8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh9F8VPK8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.15■□□□□ 0.34
Pcdh9F8VPK8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms