Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Gm17661-201ENSMUST00000170317 270 ntBASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Gm43183-201ENSMUST00000200632 547 ntBASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Gm10602-201ENSMUST00000098239 609 ntBASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
C530025M09RikF6RGA8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
C530025M09RikF6RGA8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
C530025M09RikF6RGA8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
C530025M09RikF6RGA8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Gm37025-201ENSMUST00000195159 829 ntBASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Gm20049-201ENSMUST00000219950 730 ntBASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
C530025M09RikF6RGA8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms