Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm8879F6R3J9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.04■□□□□ 0.16
Gm8879F6R3J9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm8879F6R3J9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm8879F6R3J9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm8879F6R3J9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Gm8879F6R3J9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm8879F6R3J9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Gm8879F6R3J9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm8879F6R3J9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm8879F6R3J9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms