Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Pkd1-207ENSMUST00000228550 1050 ntBASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Gm3880A0A1B0GSB3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Gm3880A0A1B0GSB3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Gm3880A0A1B0GSB3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Gm3880A0A1B0GSB3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Gm45855-201ENSMUST00000212546 880 ntBASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Gm37736-201ENSMUST00000193564 2802 ntBASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Gm3880A0A1B0GSB3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Gm43352-201ENSMUST00000196419 3065 ntBASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Gm16499-203ENSMUST00000204633 2177 ntBASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Gm3880A0A1B0GSB3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Gm3880A0A1B0GSB3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Gm3880A0A1B0GSB3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms