Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm27000-201ENSMUST00000182943 842 ntBASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv13-2A0A140T8N6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv13-2A0A140T8N6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv13-2A0A140T8N6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms