Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Gm11950-201ENSMUST00000121615 838 ntBASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Gm7461-201ENSMUST00000058918 827 ntBASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cfap99A0A140LIX9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfap99A0A140LIX9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfap99A0A140LIX9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfap99A0A140LIX9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfap99A0A140LIX9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cfap99A0A140LIX9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Gm19721-201ENSMUST00000195284 1764 ntBASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cfap99A0A140LIX9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms