Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm15820-201ENSMUST00000201566 728 ntBASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm9847-201ENSMUST00000052528 599 ntBASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm5812-201ENSMUST00000061073 957 ntBASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12d-3A0A075B6A4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12d-3A0A075B6A4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav12d-3A0A075B6A4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms