Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Gm24841-201ENSMUST00000158676 357 ntBASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav9d-1A0A075B699 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-1A0A075B699 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trav9d-1A0A075B699 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-1A0A075B699 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms