Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav16A0A075B653 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav16A0A075B653 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav16A0A075B653 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Flg-201ENSMUST00000050758 1488 ntBASIC13□□□□□ -0.33
Trav16A0A075B653 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav16A0A075B653 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Gm18671-201ENSMUST00000214826 683 ntBASIC13□□□□□ -0.33
Trav16A0A075B653 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13□□□□□ -0.33
Trav16A0A075B653 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav16A0A075B653 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav16A0A075B653 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.99□□□□□ -0.33
Trav16A0A075B653 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.99□□□□□ -0.33
Trav16A0A075B653 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav16A0A075B653 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav16A0A075B653 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms