Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-2A0A075B638 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Gm6576-201ENSMUST00000169678 883 ntBASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-2A0A075B638 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gm7291-201ENSMUST00000199147 382 ntBASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-2A0A075B638 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms