Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Gm15165-201ENSMUST00000118140 502 ntBASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Gm44454-201ENSMUST00000198541 138 ntBASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav8n-2A0A075B633 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav8n-2A0A075B633 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Gm44430-201ENSMUST00000203376 995 ntBASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8n-2A0A075B633 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8n-2A0A075B633 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8n-2A0A075B633 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8n-2A0A075B633 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms