Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9n-4A0A075B631 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Gm37292-201ENSMUST00000192062 758 ntBASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Trmt13-210ENSMUST00000198454 880 ntBASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav9n-4A0A075B631 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-4A0A075B631 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Haglr-201ENSMUST00000100000 2085 ntBASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-4A0A075B631 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms