Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC122108.2-201ENST00000611946 526 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AL080312.2-201ENST00000613001 630 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC015712.7-201ENST00000615211 635 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC096861.1-201ENST00000616652 240 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AL121895.2-201ENST00000619558 447 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC087752.1-201ENST00000391360 558 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 MCTS2P-201ENST00000394552 546 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 NACAP7-201ENST00000407371 609 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 RNA5SP156-201ENST00000410250 110 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 RPA2P2-201ENST00000419698 796 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL645936.1-201ENST00000441979 518 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 HSFY3P-201ENST00000444242 1191 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 RPS23P9-201ENST00000448848 438 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL445669.2-201ENST00000454425 421 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC107398.1-201ENST00000486904 505 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC034244.1-201ENST00000507687 207 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC106872.4-201ENST00000510050 523 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC021193.1-201ENST00000511607 420 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC074087.1-201ENST00000512059 724 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 MTCO1P47-201ENST00000523889 1271 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC109446.2-201ENST00000567872 497 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL109653.1-201ENST00000603091 248 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL353778.1-201ENST00000603149 408 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AC245008.1-201ENST00000608123 476 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AL096712.1-201ENST00000614561 159 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 AP000473.2-201ENST00000602659 1537 ntBASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
AMBRA1Q9C0C7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 NCOA4P2-201ENST00000340589 1813 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL591135.1-201ENST00000401578 5914 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 Y_RNA.169-201ENST00000363745 96 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 Y_RNA.472-201ENST00000384322 102 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 RNA5SP105-201ENST00000391123 113 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 ATP5HP3-201ENST00000396994 486 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP206-201ENST00000410823 293 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms