Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RN7SKP67-201ENST00000515905 235 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 RNU6-1308P-201ENST00000516817 103 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AP003080.1-202ENST00000526526 915 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC244502.2-201ENST00000543361 851 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL049779.3-201ENST00000557141 606 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC008507.2-201ENST00000588402 1176 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AL139407.1-201ENST00000613826 1175 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC126544.2-201ENST00000625174 749 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 AC092451.3-201ENST00000625067 1343 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 MT-RNR2-201ENST00000387347 1559 ntBASIC5.63□□□□□ -1.51
HMGB4Q8WW32 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB4Q8WW32 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 RNA5SP335-201ENST00000363817 110 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 RNU6-468P-201ENST00000384003 109 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MIR585-201ENST00000384887 94 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MTATP6P31-201ENST00000406985 692 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 FO393414.1-201ENST00000428697 1184 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 OR52B5P-201ENST00000435337 951 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL606517.1-201ENST00000446914 387 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AL445687.2-201ENST00000458156 728 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 GTF2IP9-201ENST00000502460 301 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC010460.2-201ENST00000509054 677 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 IGLV3-24-201ENST00000517477 197 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC087894.1-201ENST00000538359 518 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC126177.5-201ENST00000549599 178 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC084759.1-201ENST00000561168 290 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AGGF1P7-201ENST00000562369 913 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MIR3691-201ENST00000578066 90 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC011492.1-201ENST00000600023 315 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC112503.1-201ENST00000608436 391 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC126915.2-201ENST00000610957 190 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 AC025574.2-201ENST00000615621 514 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 OR52B5P-202ENST00000641118 1110 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 MFSD8-213ENST00000641134 1327 ntBASIC5.62□□□□□ -1.51
HMGB4Q8WW32 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB4Q8WW32 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RPL23AP4-201ENST00000427757 463 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 FAM96AP1-201ENST00000430879 482 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 HSPD1P14-201ENST00000432666 1618 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 BX679664.2-201ENST00000439282 283 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC069540.1-201ENST00000446320 988 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 PSMC1P13-201ENST00000458195 985 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms